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Trans-eQTLs across different cancer types

In trans-eQTL analysis, we identified 231,210 eQTL−gene pairs at FDR < 0.05 in 33 cancer types for users to search or browse.

     

e.g., "PRAD"
e.g., "rs7231881"
e.g., "SMAD4"


     

Cancer type
SNP ID
SNP position (hg19)
Alleles (A/a)
Gene symbol
Gene position (hg19)
Beta
t-stat
p-valule
Display
BLCA rs1390061 chr8:15276092 C/T GTF2E2 chr8:30435835-30515768:- -0.65 -6.26 1.02E-9 Box Plot
BLCA rs1390061 chr8:15276092 C/T HMBOX1 chr8:28747911-28922281:+ -0.66 -6.63 1.12E-10 Box Plot
BLCA rs1390061 chr8:15276092 C/T INTS10 chr8:19674651-19709594:+ -0.68 -6.73 6.4E-11 Box Plot
BLCA rs1390061 chr8:15276092 C/T INTS9 chr8:28625178-28747759:- -0.73 -6.83 3.41E-11 Box Plot
BLCA rs1390061 chr8:15276092 C/T KIAA1967 chr8:22462257-22477981:+ -0.77 -7.48 5.14E-13 Box Plot
BLCA rs1390061 chr8:15276092 C/T LEPROTL1 chr8:29952914-30034724:+ -0.66 -6 4.54E-9 Box Plot
BLCA rs1390061 chr8:15276092 C/T MCPH1 chr8:6264113-6506025:+ -0.76 -7.18 3.58E-12 Box Plot
BLCA rs1390061 chr8:15276092 C/T MTMR9 chr8:11141925-11185655:+ -0.6 -6.32 7.11E-10 Box Plot
BLCA rs1390061 chr8:15276092 C/T NUDT18 chr8:21964383-21966932:- -0.58 -6.06 3.32E-9 Box Plot
BLCA rs1390061 chr8:15276092 C/T PCM1 chr8:17780349-17887453:+ -0.65 -6.73 6.39E-11 Box Plot
BLCA rs1390061 chr8:15276092 C/T PINX1 chr8:10622473-10697394:- -0.57 -6.41 4.36E-10 Box Plot
BLCA rs1390061 chr8:15276092 C/T POLR3D chr8:22102617-22112113:+ -0.71 -7.27 1.97E-12 Box Plot
BLCA rs1390061 chr8:15276092 C/T PPP2CB chr8:30631973-30671830:- -0.6 -6.27 9.65E-10 Box Plot
BLCA rs1390061 chr8:15276092 C/T PPP2R2A chr8:26149007-26230196:+ -0.64 -6.55 1.85E-10 Box Plot
BLCA rs1390061 chr8:15276092 C/T R3HCC1 chr8:23127633-23153792:+ -0.66 -7.03 9.26E-12 Box Plot